plasmidcanvas
latest
Contents:
What is plasmidcanvas?
Bugs, feature requests and contributing
Prerequisites
Installation
Usage
Tutorial
Customising your plasmid map
Example 1 - Creating a map of pBR322
Example 2 - Demonstrating overlapping features on pBR322
Example 3 - pBR322 with curved text, mixed labels and more
API Reference
plasmidcanvas
Index
Edit on GitHub
Index
A
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B
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C
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D
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E
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F
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G
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L
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M
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N
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P
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R
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S
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T
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U
A
add_feature() (plasmidcanvas.plasmid.Plasmid method)
ArrowFeature (class in plasmidcanvas.feature)
B
base_pair (plasmidcanvas.feature.SinglePairFeature attribute)
base_pairs (plasmidcanvas.plasmid.Plasmid attribute)
C
circular_length() (in module plasmidcanvas._utils)
circular_midpoint() (in module plasmidcanvas._utils)
color (plasmidcanvas.feature.Feature attribute)
CurvedMultiPairLabel (class in plasmidcanvas.feature)
CurvedText (class in plasmidcanvas._curvedtext)
D
DEFAULT_FONT_COLOR (plasmidcanvas.feature.LabelBase attribute)
DEFAULT_FONT_SIZE (plasmidcanvas.feature.LabelBase attribute)
DEFAULT_LABEL_FONT_SIZE (in module plasmidcanvas._utils)
direction (plasmidcanvas.feature.DirectionalMultiPairFeature attribute)
DirectionalMultiPairFeature (class in plasmidcanvas.feature)
draw() (plasmidcanvas._curvedtext.CurvedText method)
E
end_pair (plasmidcanvas.feature.MultiPairFeature attribute)
F
Feature (class in plasmidcanvas.feature)
font_color (plasmidcanvas.feature.LabelBase attribute)
font_size (plasmidcanvas.feature.LabelBase attribute)
G
get_base_pair() (plasmidcanvas.feature.SinglePairFeature method)
get_base_pairs() (plasmidcanvas.plasmid.Plasmid method)
get_center() (plasmidcanvas.plasmid.Plasmid method)
get_color() (plasmidcanvas.feature.Feature method)
(plasmidcanvas.plasmid.Plasmid method)
get_curve_alignment() (plasmidcanvas.feature.CurvedMultiPairLabel method)
get_direction() (plasmidcanvas.feature.DirectionalMultiPairFeature method)
get_end_pair() (plasmidcanvas.feature.MultiPairFeature method)
get_feature_label_font_size() (plasmidcanvas.plasmid.Plasmid method)
get_features() (plasmidcanvas.plasmid.Plasmid method)
get_font_color() (plasmidcanvas.feature.LabelBase method)
get_font_size() (plasmidcanvas.feature.LabelBase method)
get_label_font_size() (plasmidcanvas.feature.MultiPairFeature method)
get_label_styles() (plasmidcanvas.feature.MultiPairFeature method)
get_label_text() (plasmidcanvas.feature.LabelBase method)
get_line_color() (plasmidcanvas.feature.SinglePairLabel method)
get_line_length_sf() (plasmidcanvas.feature.SinglePairLabel method)
get_line_width_scale_factor() (plasmidcanvas.feature.ArrowFeature method)
(plasmidcanvas.feature.RectangleFeature method)
get_marker_distance_sf() (plasmidcanvas.plasmid.Plasmid method)
get_marker_style() (plasmidcanvas.plasmid.Plasmid method)
get_name() (plasmidcanvas.feature.Feature method)
(plasmidcanvas.plasmid.Plasmid method)
get_number_of_markers() (plasmidcanvas.plasmid.Plasmid method)
get_orbit() (plasmidcanvas.feature.MultiPairFeature method)
get_plasmid_line_width() (plasmidcanvas.plasmid.Plasmid method)
get_plasmid_line_width_sf() (plasmidcanvas.plasmid.Plasmid method)
get_start_pair() (plasmidcanvas.feature.MultiPairFeature method)
get_tick_color() (plasmidcanvas.plasmid.Plasmid method)
get_tick_style() (plasmidcanvas.plasmid.Plasmid method)
L
label_style (plasmidcanvas.feature.MultiPairFeature attribute)
label_text (plasmidcanvas.feature.LabelBase attribute)
LabelBase (class in plasmidcanvas.feature)
length() (plasmidcanvas.feature.MultiPairFeature method)
line_color (plasmidcanvas.feature.SinglePairLabel attribute)
line_length_sf (plasmidcanvas.feature.SinglePairLabel attribute)
line_width_scale_factor (plasmidcanvas.feature.ArrowFeature attribute)
(plasmidcanvas.feature.RectangleFeature attribute)
M
module
plasmidcanvas
plasmidcanvas._curvedtext
plasmidcanvas._utils
plasmidcanvas.feature
plasmidcanvas.plasmid
MultiPairFeature (class in plasmidcanvas.feature)
N
name (plasmidcanvas.feature.Feature attribute)
(plasmidcanvas.plasmid.Plasmid attribute)
P
Plasmid (class in plasmidcanvas.plasmid)
plasmidcanvas
module
plasmidcanvas._curvedtext
module
plasmidcanvas._utils
module
plasmidcanvas.feature
module
plasmidcanvas.plasmid
module
plot() (plasmidcanvas.plasmid.Plasmid method)
R
RectangleFeature (class in plasmidcanvas.feature)
RestrictionSite (class in plasmidcanvas.feature)
S
save_to_file() (plasmidcanvas.plasmid.Plasmid method)
set_base_pair() (plasmidcanvas.feature.SinglePairFeature method)
set_base_pairs() (plasmidcanvas.plasmid.Plasmid method)
set_center() (plasmidcanvas.plasmid.Plasmid method)
set_color() (plasmidcanvas.feature.Feature method)
(plasmidcanvas.plasmid.Plasmid method)
set_curve_alignment() (plasmidcanvas.feature.CurvedMultiPairLabel method)
set_direction() (plasmidcanvas.feature.DirectionalMultiPairFeature method)
set_end_pairs() (plasmidcanvas.feature.MultiPairFeature method)
set_feature_label_font_size() (plasmidcanvas.plasmid.Plasmid method)
set_font_color() (plasmidcanvas.feature.LabelBase method)
set_font_size() (plasmidcanvas.feature.LabelBase method)
set_label_font_size() (plasmidcanvas.feature.MultiPairFeature method)
set_label_styles() (plasmidcanvas.feature.MultiPairFeature method)
set_label_text() (plasmidcanvas.feature.LabelBase method)
set_line_color() (plasmidcanvas.feature.SinglePairLabel method)
set_line_length_sf() (plasmidcanvas.feature.SinglePairLabel method)
set_line_width_scale_factor() (plasmidcanvas.feature.ArrowFeature method)
(plasmidcanvas.feature.RectangleFeature method)
set_marker_distance_sf() (plasmidcanvas.plasmid.Plasmid method)
set_marker_style() (plasmidcanvas.plasmid.Plasmid method)
set_name() (plasmidcanvas.feature.Feature method)
(plasmidcanvas.plasmid.Plasmid method)
set_number_of_markers() (plasmidcanvas.plasmid.Plasmid method)
set_orbit() (plasmidcanvas.feature.MultiPairFeature method)
set_plasmid_line_width() (plasmidcanvas.plasmid.Plasmid method)
set_plasmid_line_width_sf() (plasmidcanvas.plasmid.Plasmid method)
set_start_pairs() (plasmidcanvas.feature.MultiPairFeature method)
set_tick_color() (plasmidcanvas.plasmid.Plasmid method)
set_tick_style() (plasmidcanvas.plasmid.Plasmid method)
set_zorder() (plasmidcanvas._curvedtext.CurvedText method)
SinglePairFeature (class in plasmidcanvas.feature)
SinglePairLabel (class in plasmidcanvas.feature)
start_pair (plasmidcanvas.feature.MultiPairFeature attribute)
SUPPORTED_CURVE_ALIGNMENTS (plasmidcanvas.feature.CurvedMultiPairLabel attribute)
SUPPORTED_LABEL_STYLES (plasmidcanvas.feature.MultiPairFeature attribute)
SUPPORTED_MARKER_STYLES (plasmidcanvas.plasmid.Plasmid attribute)
SUPPORTED_TICK_STYLES (plasmidcanvas.plasmid.Plasmid attribute)
T
to_counter_clockwise() (in module plasmidcanvas._utils)
U
update_positions() (plasmidcanvas._curvedtext.CurvedText method)
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